Comment on ResearchAgent: Iterative Research Idea Generation Using LLMsparentComments−ssn2yI am interested in this. Can you point to a reference about the application of LLMs to sequence secreening? Thanks.−robwwilliams2yScaling if context window size has been a problem but now good potential of solutions using mamba.HyenaDNA is one to look at wrt DNA.And here are some other interesting links from Erik Garrison—a leader in pangenomics.https://hazyresearch.stanford.edu/blog/2023-06-29-hyena-dnahttps://github.com/instadeepai/nucleotide-transformerhttps://dl.acm.org/doi/pdf/10.1145/3535508.3545512https://github.com/dnbaker/bioseqhttps://huggingface.co/AIRI-Institute/gena-lm-bert-basehttps://discuss.huggingface.co/t/dna-long-sequence-tokenizat...
Comments
I am interested in this. Can you point to a reference about the application of LLMs to sequence secreening? Thanks.
Scaling if context window size has been a problem but now good potential of solutions using mamba.
HyenaDNA is one to look at wrt DNA.
And here are some other interesting links from Erik Garrison—a leader in pangenomics.
https://hazyresearch.stanford.edu/blog/2023-06-29-hyena-dna
https://github.com/instadeepai/nucleotide-transformer
https://dl.acm.org/doi/pdf/10.1145/3535508.3545512
https://github.com/dnbaker/bioseq
https://huggingface.co/AIRI-Institute/gena-lm-bert-base
https://discuss.huggingface.co/t/dna-long-sequence-tokenizat...